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A polysaccharide utilization locus from Chitinophaga pinensis simultaneously targets chitin and β-glucans found in fungal cell walls
KTH, School of Engineering Sciences in Chemistry, Biotechnology and Health (CBH), Chemistry, Glycoscience.ORCID iD: 0009-0002-4263-2762
KTH, School of Engineering Sciences in Chemistry, Biotechnology and Health (CBH), Chemistry, Glycoscience.ORCID iD: 0009-0004-7782-7732
KTH, School of Engineering Sciences in Chemistry, Biotechnology and Health (CBH), Chemistry, Glycoscience.ORCID iD: 0000-0002-4807-6608
KTH, School of Engineering Sciences in Chemistry, Biotechnology and Health (CBH), Chemistry, Glycoscience.ORCID iD: 0000-0001-5442-1597
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2023 (English)In: mSphere, E-ISSN 2379-5042, Vol. 8, no 4Article in journal (Refereed) Published
Abstract [en]

In nature, complex carbohydrates are rarely found as pure isolated polysaccharides. Instead, bacteria in competitive environments are presented with glycans embedded in heterogeneous matrices such as plant or microbial cell walls. Members of the Bacteroidota phylum thrive in such ecosystems because they are efficient at extracting nutrients from complex substrates, secreting consortia of synergistic enzymes to release metabolizable sugars. Carbohydrate-binding modules (CBMs) are used to target enzymes to substrates, enhancing reaction rate and product release. Additionally, genome organizational tools like polysaccharide utilization loci (PULs) ensure that the appropriate set of enzymes is produced when needed. In this study, we show that the soil bacterium Chitinophaga pinensis uses a PUL and several CBMs to coordinate the activities of enzymes targeting two distinct polysaccharides found in fungal cell walls. We describe the enzymatic activities and carbohydrate-binding behaviors of components of the fungal cell wall utilization locus (FCWUL), which uses multiple chitinases and one β-1,3-glucanase to hydrolyze two different substrates. Unusually, one of the chitinases is appended to a β-glucan-binding CBM, implying targeting to a bulk cell wall substrate rather than to the specific polysaccharide being hydrolyzed. Based on our characterization of the PUL’s outer membrane sensor protein, we suggest that the FCWUL is activated by β-1,3-glucans, even though most of its enzymes are chitin-degrading. Our data showcase the complexity of polysaccharide deconstruction in nature and highlight an elegant solution for how multiple different glycans can be accessed using one enzymatic cascade.

Place, publisher, year, edition, pages
American Society for Microbiology , 2023. Vol. 8, no 4
National Category
Biochemistry Molecular Biology Microbiology
Identifiers
URN: urn:nbn:se:kth:diva-333943DOI: 10.1128/msphere.00244-23ISI: 001037206600001PubMedID: 37493618Scopus ID: 2-s2.0-85168802162OAI: oai:DiVA.org:kth-333943DiVA, id: diva2:1787819
Funder
Swedish Research Council, 2017-04906Swedish Energy Agency, 2019-006926
Note

QC 20230823

Available from: 2023-08-15 Created: 2023-08-15 Last updated: 2025-03-21Bibliographically approved

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Lu, ZijiaKvammen, AlmaLi, HeHao, MengshuInman, Annie R.Bulone, VincentMcKee, Lauren S.

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