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Tunable and Portable Extreme-Scale Drug Discovery Platform at Exascale: the LIGATE Approach
Politecnico di Milano-DEIB, Milan, Italy.
KTH, School of Engineering Sciences (SCI), Applied Physics, Biophysics.ORCID iD: 0000-0001-5949-148X
KTH, School of Engineering Sciences (SCI), Applied Physics, Biophysics.ORCID iD: 0000-0002-2734-2794
PH3 GmbH, University of Innsbruck, Innsbruck, Austria.
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Number of Authors: 342023 (English)In: Proceedings of the 20th ACM International Conference on Computing Frontiers 2023, CF 2023, Association for Computing Machinery (ACM) , 2023, p. 272-278Conference paper, Published paper (Refereed)
Abstract [en]

Today digital revolution is having a dramatic impact on the pharmaceutical industry and the entire healthcare system. The implementation of machine learning, extreme-scale computer simulations, and big data analytics in the drug design and development process offers an excellent opportunity to lower the risk of investment and reduce the time to the patient. Within the LIGATE project 1, we aim to integrate, extend, and co-design best-in-class European components to design Computer-Aided Drug Design (CADD) solutions exploiting today's high-end supercomputers and tomorrow's Exascale resources, fostering European competitiveness in the field. The proposed LIGATE solution is a fully integrated workflow that enables to deliver the result of a virtual screening campaign for drug discovery with the highest speed along with the highest accuracy. The full automation of the solution and the possibility to run it on multiple supercomputing centers at once permit to run an extreme scale in silico drug discovery campaign in few days to respond promptly for example to a worldwide pandemic crisis.

Place, publisher, year, edition, pages
Association for Computing Machinery (ACM) , 2023. p. 272-278
Keywords [en]
HPC, Molecular Docking, Molecular Dynamics, Virtual Screening
National Category
Embedded Systems
Identifiers
URN: urn:nbn:se:kth:diva-336728DOI: 10.1145/3587135.3592172ISI: 001116950900045Scopus ID: 2-s2.0-85169540276OAI: oai:DiVA.org:kth-336728DiVA, id: diva2:1798599
Conference
20th ACM International Conference on Computing Frontiers, CF 2023, Bologna, Italy, May 9 2023 - May 11 2023
Note

Part of ISBN 9798400701405

QC 20230919

Available from: 2023-09-19 Created: 2023-09-19 Last updated: 2024-03-12Bibliographically approved

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Wingbermühle, SebastianLindahl, Erik

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