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Synthesis of type 1 Lewis b hexasaccharide antigen structures featuring flexible incorporation ofl-[U-C-13(6)]-fucose for NMR binding studies
Bangor Univ, Sch Nat Sci, Bangor LL57 2UW, Gwynedd, Wales..
Univ Coll Dublin, Ctr Synth & Chem Biol, Dublin 4, Ireland..
Univ Coll Dublin, Ctr Synth & Chem Biol, Dublin 4, Ireland..ORCID iD: 0000-0003-3896-9346
Univ Coll Dublin, Ctr Synth & Chem Biol, Dublin 4, Ireland..ORCID iD: 0000-0002-8273-4918
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2020 (English)In: Organic and biomolecular chemistry, ISSN 1477-0520, E-ISSN 1477-0539, Vol. 18, no 23, p. 4452-4458Article in journal (Refereed) Published
Abstract [en]

While(13)C-labelled proteins are common tools in NMR studies, lack of access to(13)C-labelled carbohydrate structures has restricted their use.l-Fucose is involved in a wide range of physiological and pathophysiological processes in mammalian organisms. Here,l-[U-C-13(6)]-Fuc labelled type I Lewis b (Le(b)) structures have been synthesised for use in NMR binding studies with the Blood-group Antigen Binding Adhesin (BabA), a membrane-bound protein from the bacteriumHelicobacter pylori. As part of this work, an efficient synthesis of a benzylatedl-[U-C-13(6)]-Fuc thioglycoside donor froml-[U-C-13(6)]-Gal has been developed. The design and synthesis of an orthogonally protected tetrasaccharide precursor enabled controlled introduction of one or two(13)C-labelled or non-labelled fucosyl residues prior to global deprotection. NMR analysis showed that it is straightforward to assign the anomeric centres as well as the H-5 positions to the individual fucosyl residues which are relevant for NMR binding studies.

Place, publisher, year, edition, pages
Royal Society of Chemistry (RSC) , 2020. Vol. 18, no 23, p. 4452-4458
National Category
Organic Chemistry
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URN: urn:nbn:se:kth:diva-305691DOI: 10.1039/d0ob00426jISI: 000542959000016PubMedID: 32478348Scopus ID: 2-s2.0-85092653383OAI: oai:DiVA.org:kth-305691DiVA, id: diva2:1617271
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QC 20211206

Available from: 2021-12-06 Created: 2021-12-06 Last updated: 2022-06-25Bibliographically approved

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Lahmann, Martina

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