kth.sePublications
Change search
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf
Arrhythmia classification of 12-lead and reduced-lead electrocardiograms via recurrent networks, scattering, and phase harmonic correlation
PeriGen Inc, Montreal, PQ, Canada.;McGill Univ, Montreal, PQ, Canada..ORCID iD: 0000-0002-6945-6271
Ecole Cent Nantes, CNRS, LS2N, Cnrs, France..ORCID iD: 0000-0003-0580-1651
Flatiron Inst, New York, NY USA..
UFZ Helmholtz Ctr Environm Res, Dept Mol Syst Biol, Leipzig, Germany..
Show others and affiliations
2022 (English)In: Physiological Measurement, ISSN 0967-3334, E-ISSN 1361-6579, Vol. 43, no 9, article id 094002Article in journal (Refereed) Published
Abstract [en]

We describe an automatic classifier of arrhythmias based on 12-lead and reduced-lead electrocardiograms. Our classifier comprises four modules: scattering transform (ST), phase harmonic correlation (PHC), depthwise separable convolutions (DSC), and a long short-term memory (LSTM) network. It is trained on PhysioNet/Computing in Cardiology Challenge 2021 data. The ST captures short-term temporal ECG modulations while the PHC characterizes the phase dependence of coherent ECG components. Both reduce the sampling rate to a few samples per typical heart beat. We pass the output of the ST and PHC to a depthwise-separable convolution layer (DSC) which combines lead responses separately for each ST or PHC coefficient and then combines resulting values across all coefficients. At a deeper level, two LSTM layers integrate local variations of the input over long time scales. We train in an end-to-end fashion as a multilabel classification problem with a normal and 25 arrhythmia classes. Lastly, we use canonical correlation analysis (CCA) for transfer learning from 12-lead ST and PHC representations to reduced-lead ones. After local cross-validation on the public data from the challenge, our team 'BitScattered' achieved the following results: 0.682 +/- 0.0095 for 12-lead; 0.666 +/- 0.0257 for 6-lead; 0.674 +/- 0.0185 for 4-lead; 0.661 +/- 0.0098 for 3-lead; and 0.662 +/- 0.0151 for 2-lead.

Place, publisher, year, edition, pages
IOP Publishing , 2022. Vol. 43, no 9, article id 094002
Keywords [en]
electrocardiography, scattering transform, phase harmonic correlation, canonical correlation analysis, convolutional neural networks, long short-term memory networks
National Category
Cardiac and Cardiovascular Systems
Identifiers
URN: urn:nbn:se:kth:diva-319098DOI: 10.1088/1361-6579/ac77d1ISI: 000852329400001PubMedID: 35688143Scopus ID: 2-s2.0-85138128248OAI: oai:DiVA.org:kth-319098DiVA, id: diva2:1698767
Note

QC 20220926

Available from: 2022-09-26 Created: 2022-09-26 Last updated: 2023-05-22Bibliographically approved

Open Access in DiVA

No full text in DiVA

Other links

Publisher's full textPubMedScopus

Authority records

Campoy Rodriguez, AdrianAndén, Joakim

Search in DiVA

By author/editor
Warrick, Philip A.Lostanlen, VincentCampoy Rodriguez, AdrianAndén, Joakim
By organisation
School of Electrical Engineering and Computer Science (EECS)Mathematics (Div.)
In the same journal
Physiological Measurement
Cardiac and Cardiovascular Systems

Search outside of DiVA

GoogleGoogle Scholar

doi
pubmed
urn-nbn

Altmetric score

doi
pubmed
urn-nbn
Total: 59 hits
CiteExportLink to record
Permanent link

Direct link
Cite
Citation style
  • apa
  • ieee
  • modern-language-association-8th-edition
  • vancouver
  • Other style
More styles
Language
  • de-DE
  • en-GB
  • en-US
  • fi-FI
  • nn-NO
  • nn-NB
  • sv-SE
  • Other locale
More languages
Output format
  • html
  • text
  • asciidoc
  • rtf