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Structure and dynamics of differential ligand binding in the human ρ-type GABAA receptor
Department of Biochemistry and Biophysics, SciLifeLab, Stockholm University, 17121 Solna, Sweden.
Department of Biochemistry and Biophysics, SciLifeLab, Stockholm University, 17121 Solna, Sweden.
KTH, School of Engineering Sciences (SCI), Applied Physics, Biophysics. KTH, Centres, Science for Life Laboratory, SciLifeLab.ORCID iD: 0000-0003-3542-333X
Department of Biochemistry and Biophysics, SciLifeLab, Stockholm University, 17121 Solna, Sweden.
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2023 (English)In: Neuron, ISSN 0896-6273, E-ISSN 1097-4199, Vol. 111, no 21, p. 5-3450Article in journal (Refereed) Published
Abstract [en]

The neurotransmitter γ-aminobutyric acid (GABA) drives critical inhibitory processes in and beyond the nervous system, partly via ionotropic type-A receptors (GABAARs). Pharmacological properties of ρ-type GABAARs are particularly distinctive, yet the structural basis for their specialization remains unclear. Here, we present cryo-EM structures of a lipid-embedded human ρ1 GABAAR, including a partial intracellular domain, under apo, inhibited, and desensitized conditions. An apparent resting state, determined first in the absence of modulators, was recapitulated with the specific inhibitor (1,2,5,6-tetrahydropyridin-4-yl)methylphosphinic acid and blocker picrotoxin and provided a rationale for bicuculline insensitivity. Comparative structures, mutant recordings, and molecular simulations with and without GABA further explained the sensitized but slower activation of ρ1 relative to canonical subtypes. Combining GABA with picrotoxin also captured an apparent uncoupled intermediate state. This work reveals structural mechanisms of gating and modulation with applications to ρ-specific pharmaceutical design and to our biophysical understanding of ligand-gated ion channels.

Place, publisher, year, edition, pages
Elsevier BV , 2023. Vol. 111, no 21, p. 5-3450
Keywords [en]
cryo-EM, Cys-loop receptor, GABA receptors A, GABA receptors C, ligand-gated ion channel, ρ1 GABA receptor A
National Category
Physiology and Anatomy Neurosciences
Identifiers
URN: urn:nbn:se:kth:diva-339491DOI: 10.1016/j.neuron.2023.08.006ISI: 001109101000001PubMedID: 37659407Scopus ID: 2-s2.0-85175088643OAI: oai:DiVA.org:kth-339491DiVA, id: diva2:1811381
Note

QC 20231113

Available from: 2023-11-13 Created: 2023-11-13 Last updated: 2025-02-10Bibliographically approved

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Haloi, NandanLindahl, Erik

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