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Soft- and hardware development for a prism TIRF microscope for high-throughput biophysical measurements
KTH, School of Engineering Sciences (SCI), Applied Physics.
2024 (English)Independent thesis Advanced level (degree of Master (Two Years)), 20 credits / 30 HE creditsStudent thesisAlternative title
Mjuk- och hårdvaruutveckling för ett prism TIRF-mikroskop för biofysiska mätningar med high-throughput (Swedish)
Abstract [en]

This thesis presents the development of soft- and hardware for a high-throughput prism-based Total Internal Reflection Fluorescence (pTIRF) microscope. By re-purposing components from various sources, most notably from an Illumina sequencer, the project details the build and integration of necessary components for the microscopy platform. This pTIRF setup aims to enable high-throughput quantitative binding measurements between biomolecules by combining the sensitivity of TIRF microscopy with the scalability of sequencing technology. The project details the construction process, experimental setup, and potential applications of the developed platform.

Abstract [sv]

Projektet beskriver utvecklingen av mjuk- och hårdvara för ett high-troughput prismabaserat Total Internal Reflection Fluorescence (pTIRF) mikroskop. Genom att återanvända olika komponenter, framför allt från en Illuminasekvenserare, behandlar projektet tillverkning och integrering av nödvändiga komponenter för mikroskopiplattformen. Denna pTIRF-uppställning ämnar utföra high-throughput kvantitativa bindningsmätningar mellan biomolekyler genom att kombinera känsligheten hos TIRF-mikroskopi med skalbarheten hos sekvenseringsteknologi. Uppsatsen beskriver byggprocessen, det experimentella upplägget och de potentiella tillämpningarna av den utvecklade plattformen.

Place, publisher, year, edition, pages
2024.
Series
TRITA-SCI-GRU ; 2024:124
Keywords [en]
pTIRF, high-throughput, microscopy, microcontroller, micromanager, C++
Keywords [sv]
pTIRF, high-throughput, microscopy, microcontroller, micromanager, C++
National Category
Physical Sciences
Identifiers
URN: urn:nbn:se:kth:diva-348584OAI: oai:DiVA.org:kth-348584DiVA, id: diva2:1877613
External cooperation
SciLifeLab
Subject / course
Physics
Educational program
Master of Science - Engineering Physics
Supervisors
Examiners
Available from: 2024-06-26 Created: 2024-06-26 Last updated: 2024-06-26Bibliographically approved

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CiteExportLink to record
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Citation style
  • apa
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