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Creating, documenting and sharing network models
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2012 (English)In: Network, ISSN 0954-898X, E-ISSN 1361-6536, Vol. 23, no 4, 131-149 p.Article, review/survey (Refereed) Published
Abstract [en]

As computational neuroscience matures, many simulation environments are available that are useful for neuronal network modeling. However, methods for successfully documenting models for publication and for exchanging models and model components among these projects are still under development. Here we briefly review existing software and applications for network model creation, documentation and exchange. Then we discuss a few of the larger issues facing the field of computational neuroscience regarding network modeling and suggest solutions to some of these problems, concentrating in particular on standardized network model terminology, notation, and descriptions and explicit documentation of model scaling. We hope this will enable and encourage computational neuroscientists to share their models more systematically in the future.

Place, publisher, year, edition, pages
2012. Vol. 23, no 4, 131-149 p.
Keyword [en]
Model sharing, Network models, Spiking neurons
National Category
Neurology Computer and Information Science
Identifiers
URN: urn:nbn:se:kth:diva-114319ISI: 000311837300002Scopus ID: 2-s2.0-84870717766OAI: oai:DiVA.org:kth-114319DiVA: diva2:588393
Note

QC 20130115

Available from: 2013-01-15 Created: 2013-01-15 Last updated: 2017-04-28Bibliographically approved

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Djurfeldt, Mikael
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Centre for High Performance Computing, PDC
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