Peptide retention time prediction
2016 (English)In: Mass spectrometry reviews (Print), ISSN 0277-7037, E-ISSN 1098-2787Article in journal (Refereed) PublishedText
Most methods for interpreting data from shotgun proteomics experiments are to large degree dependent on being able to predict properties of peptide-ions. Often such predicted properties are limited to molecular mass and fragment spectra, but here we put focus on a perhaps underutilized property, a peptide's chromatographic retention time. We review a couple of different principles of retention time prediction,and their applications within computational proteomics.
Place, publisher, year, edition, pages
Bioinformatics, Chromatography, Mass spectrometry, Peptides, Regression analysis, Forecasting, Molecular biology, Proteins, Chromatographic retention time, Computational proteomics, Peptide ions, Retention time prediction, Shotgun proteomics
IdentifiersURN: urn:nbn:se:kth:diva-186776DOI: 10.1002/mas.21488ScopusID: 2-s2.0-84956866259OAI: oai:DiVA.org:kth-186776DiVA: diva2:932435
QC 201606012016-06-012016-05-132016-06-01Bibliographically approved