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Bettelli, M. A., Perdigon, L. A., Zhao, L., Pereira, P. F. M., Jimenez-Quero, A., Capezza, A. J., . . . Sabino, M. A. (2025). Biodegradation, Bioassimilation and Recycling Properties of Wheat Gluten Foams. ACS AGRICULTURAL SCIENCE & TECHNOLOGY, 5(5), 805-821
Åpne denne publikasjonen i ny fane eller vindu >>Biodegradation, Bioassimilation and Recycling Properties of Wheat Gluten Foams
Vise andre…
2025 (engelsk)Inngår i: ACS AGRICULTURAL SCIENCE & TECHNOLOGY, ISSN 2692-1952, Vol. 5, nr 5, s. 805-821Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Protein-based foams are potential sustainable alternatives to petroleum-based polymer foams in e.g. single-use products. In this work, the biodegradation, bioassimilation, and recycling properties of glycerol-plasticized wheat gluten foams (using a foaming agent and gallic acid, citric acid, or genipin) were determined. The degradation was investigated at different pH levels in soil and high humidity. The fastest degradation occurred in an aqueous alkaline condition with complete degradation within 5 weeks. The foams exhibited excellent bioassimilation, comparable to or better than industrial fertilizers, particularly in promoting coriander plant growth. The additives provided specific effects: gallic acid offered antifungal properties, citric acid provided the fastest degradation at high pH, and genipin contributed with cross-linking. All three additives also contributed to antioxidant properties. Dense beta-sheet protein structures degraded more slowly than disordered/alpha-helix structures. WG foams showed only a small global warming potential and lower fossil carbon emissions than synthetic foams on a mass basis, as illustrated with a nitrile-butadiene rubber (NBR) foam. Unlike NBR, the protein foams could be recycled into films, offering an alternative to immediate composting.

sted, utgiver, år, opplag, sider
American Chemical Society (ACS), 2025
Emneord
biobased foams, wheat gluten, biodegradation, bioassimilation, recycling
HSV kategori
Identifikatorer
urn:nbn:se:kth:diva-363619 (URN)10.1021/acsagscitech.4c00798 (DOI)001460206000001 ()2-s2.0-105001941473 (Scopus ID)
Merknad

QC 20250520

Tilgjengelig fra: 2025-05-20 Laget: 2025-05-20 Sist oppdatert: 2025-05-20bibliografisk kontrollert
Zhao, L. (2025). Enzyme Engineering for Chemical Synthesis and Water Absorbing Performance. (Doctoral dissertation). Stockholm: KTH Royal Institute of Technology
Åpne denne publikasjonen i ny fane eller vindu >>Enzyme Engineering for Chemical Synthesis and Water Absorbing Performance
2025 (engelsk)Doktoravhandling, med artikler (Annet vitenskapelig)
Abstract [en]

Enzyme engineering is a powerful approach to enhancing biocatalytic performance and optimizing protein-based materials for diverse applications. This study employs ancestral sequence reconstruction (ASR), rational design, and process condition optimization to improve enzyme stability, catalytic efficiency, and functional properties. Four key areas are explored: transaminase engineering for chiral amine synthesis, enzymatic amide bond formation, Baeyer-Villiger oxidation selectivity control, and protein-based water-absorbing materials. To enhance the thermostability and substrate scope of ω-transaminase from Silicibacter pomeroyi(Sp-ATA), ASR was used to identify stabilizing mutations, improving its industrial suitability. For amide bond formation, rational design optimized Pseudomonas aeruginosa N-acyltransferase (PaAT), coupled with the adenylation domain of Segniliparus rugosus carboxylic acid reductase (CARsr-A). The engineered Y72S/F206N variant significantly enhanced conversion rates for pharmaceutically relevant carboxylic acids, providing a sustainable alternative to chemical synthesis. In Baeyer-Villiger oxidation, process optimization was investigated to control regioselectivity. Engineered Baeyer-Villiger monooxygenases (BVMOs) from Acinetobacter and Arthrobacter species shifted product distribution toward the"normal" lactone by increasing oxygen availability. For protein-based waterabsorbing materials, patatin mutagenesis altered charged amino acid composition. As demonstrated by molecular dynamics simulations, variants enriched in Lys and Asp doubled water absorption, demonstrating the potential of enzyme engineering in sustainable absorbent material development. This study integrates computational and experimental enzyme engineering strategies to improve biocatalysis for chemical synthesis and functional biomaterials, offering novel solutions for industrial biotechnology and sustainable material science.

Abstract [sv]

Enzymingenjörskonst är en kraftfull strategi för att förbättra biokatalytisk prestanda och optimera proteinbaserade material för olika tillämpningar. Denna studie tillämpar rekonstitution av förfäderssekvenser (ASR), rationell design och optimering av processförhållanden för att förbättra enzymstabilitet, katalytisk effektivitet och funktionella egenskaper. Fyra centrala områden undersöks: transaminasdesign för syntes av kirala aminer, enzymatisk amidbildning, selektivitetskontroll vid Baeyer-Villiger-oxidation samt proteinbaserade vattenabsorberande material. För att förbättra termostabiliteten och substratspektra för ω-transaminaser från Silicibacter pomeroyi (Sp-ATA) användes ASR för att identifiera stabiliserande mutationer, vilket ökade enzymets industriella användbarhet. Vid amidbindningsbildning optimerades Pseudomonas aeruginosa N-acyltransferas (PaAT) genom rationell design och kombinerades med adenyleringsdomänen från Segniliparus rugosus karboxylsyrareduktas (CARsr-A). Den modifierade varianten Y72S/F206N visade en avsevärt förbättrad omvandlingshastighet för farmaceutiskt relevanta karboxylsyror, vilket erbjuder ett hållbart alternativ till kemisk syntes. I Baeyer-Villiger-oxidation undersöktes processoptimering för att styra regioselektiviteten. Ingenjörsmässigt modifierade Baeyer-Villiger monooxygenaser (BVMOs) från Acinetobacter- och Arthrobacter-arter kunde genom ökad syrgastillgänglighet styra produktfördelningen mot den "normala" laktonen. För proteinbaserade vattenabsorberande material genomfördes mutagenes på patatin, ett protein från potatis, för att förändra sammansättningen av laddade aminosyrarester. Varianter med en högre andel lysin och asparaginsyra uppvisade en fördubblad vattenabsorption, enligt molekylär dynamik-simuleringar, vilket demonstrerar potentialen hos enzymingenjörskonst för utveckling av hållbara absorberande material. Sammanfattningsvis belyser denna studieintegrationen av beräkningsbaserade och experimentella enzymteknikstrategier för att förbättra biokatalys vid kemisk syntes och för funktionella biomaterial, och erbjuder nya lösningar för industriell bioteknik och hållbar materialvetenskap.

sted, utgiver, år, opplag, sider
Stockholm: KTH Royal Institute of Technology, 2025. s. 87
Serie
TRITA-CBH-FOU ; 2025:4
Emneord
enzyme engineering, ancestral sequence reconstruction (ASR), amide bond formation, ω- transaminase, thermostability, BVMOs, regioselectivity, super absorbent polymers (SAPs), enzymteknik, rekonstitution av förfäderssekvenser (ASR), amidbindning, ω-transaminas, termostabilitet, BVMO, regioselektivitet, superabsorberande polymerer (SAPs)
HSV kategori
Forskningsprogram
Kemi
Identifikatorer
urn:nbn:se:kth:diva-360627 (URN)978-91-8106-207-6 (ISBN)
Disputas
2025-03-28, https://kth-se.zoom.us/j/62430600641, Kollegiesalen, Brinellvägen 8, Stockholm, 10:00 (engelsk)
Opponent
Veileder
Forskningsfinansiär
KTH Royal Institute of Technology
Merknad

Embargo till och med 2026-03-28 godkänt av skolchef Amelie Eriksson Karlström via e-post 2025-03-21

QC 20250303

Tilgjengelig fra: 2025-03-03 Laget: 2025-02-28 Sist oppdatert: 2025-10-30bibliografisk kontrollert
Zhao, L., Thongrakon, B.-B., Gautom, T., Sahlberg, V. & Berglund, P. (2025). Exploring the Stability and Substrate Profile of Transaminase from Silicibacter pomeroyi with Ancestral Sequence Reconstruction. ChemBioChem, 26(13)
Åpne denne publikasjonen i ny fane eller vindu >>Exploring the Stability and Substrate Profile of Transaminase from Silicibacter pomeroyi with Ancestral Sequence Reconstruction
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2025 (engelsk)Inngår i: ChemBioChem, ISSN 1439-4227, E-ISSN 1439-7633, Vol. 26, nr 13Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Amine transaminases (ATAs), belonging to the class III transaminases within the superfamily of pyridoxal-5 '-phosphate-dependent enzymes, catalyze transamination reactions between amino donors and amino acceptors. These enzymes are particularly appealing for their role in stereospecific synthesis of chiral amines. However, the stability of most ATAs is not satisfying, limiting their suitability for industrial applications. Among them, the amine transaminase from Silicibacter pomeroyi (Sp-ATA) has drawn attention due to its high activity and broad substrate scope under mild conditions and high pH. Nevertheless, maintaining the activity at higher temperatures is a challenge. Previous studies to enhance enzyme function through directed evolution have shown promising results, yet predicting the cooperative effects of individual stabilizing mutations remains challenging. An alternative strategy is ancestral sequence reconstruction (ASR), which is based on gene sequences to create a more or less artificial phylogenetic tree. This study aims to leverage ASR techniques to explore the thermostability, solvent tolerance, and substrate profile of Sp-ATA, to find more stable transaminases. By using Sp-ATA as a template and incorporating insights from ancestral sequences, this strategy offers a promising approach for developing robust biocatalysts suitable for industrial applications.

sted, utgiver, år, opplag, sider
Wiley, 2025
Emneord
ancestral sequence reconstruction, Silicibacter pomeroyi, stability, omega-transaminase
HSV kategori
Forskningsprogram
Bioteknologi
Identifikatorer
urn:nbn:se:kth:diva-368388 (URN)10.1002/cbic.202500155 (DOI)001499843900001 ()40279196 (PubMedID)2-s2.0-105006841574 (Scopus ID)
Merknad

QC 20250815

Tilgjengelig fra: 2025-08-15 Laget: 2025-08-15 Sist oppdatert: 2025-08-15bibliografisk kontrollert
Zhao, L., Thongrakon, B.-B., Capezza, A. J. & Berglund, P. (2025). Mutagenesis study for understanding the superabsorbent behavior of patatin-based protein materials. International Journal of Biological Macromolecules, 311, Article ID 143550.
Åpne denne publikasjonen i ny fane eller vindu >>Mutagenesis study for understanding the superabsorbent behavior of patatin-based protein materials
2025 (engelsk)Inngår i: International Journal of Biological Macromolecules, ISSN 0141-8130, E-ISSN 1879-0003, Vol. 311, artikkel-id 143550Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Protein-based absorbent materials exhibit significant limitations in water retention compared to synthetic superabsorbent polymers (SAPs), widely used in agriculture, hygiene, and biomedical applications. Recent investigations have focused on leveraging highly soluble charged proteins such as patatin (a glycoprotein derived from potatoes) as natural alternatives to synthetic SAPs, given their unique structural properties and the opportunity they provide as sustainable raw material alternatives. This study investigates how the intrinsic amino acid composition and charged residues of patatin can be modified through mutagenesis to tailor its superabsorbent properties. Here, patatin was expressed in Escherichia coli to improve the water absorption capacity by altering its amino acid composition. By increasing liquid accessibility and charge density, our method of altering the charged profile of the protein significantly enhances the protein's swelling capacity, doubling its absorption compared to native patatin. Additionally, molecular dynamics simulations reveal that protein variants enriched with lysine and aspartic acid facilitate increased hydrogen bonding interactions with water molecules, thereby enhancing hydration. These results provide a fundamental understanding of how to tailor the physicochemical nature of proteins to develop them as viable bio-based absorbents for advanced sanitary applications, combining material science and biotechnology.

sted, utgiver, år, opplag, sider
Elsevier BV, 2025
Emneord
Bio-based absorbents, Patatin-like protein, Superabsorbent polymers (SAPs)
HSV kategori
Identifikatorer
urn:nbn:se:kth:diva-363420 (URN)10.1016/j.ijbiomac.2025.143550 (DOI)001510349900001 ()40311970 (PubMedID)2-s2.0-105004256343 (Scopus ID)
Merknad

QC 20250516

Tilgjengelig fra: 2025-05-15 Laget: 2025-05-15 Sist oppdatert: 2025-11-03bibliografisk kontrollert
Cui, Y., Subramaniyam, C. M., Li, L., Han, T., Kang, M., Li, J., . . . Hamedi, M. (2022). Hierarchical soot nanoparticle self-assemblies for enhanced performance as sodium-ion battery anodes. Journal of Materials Chemistry A, 10(16), 9059-9066
Åpne denne publikasjonen i ny fane eller vindu >>Hierarchical soot nanoparticle self-assemblies for enhanced performance as sodium-ion battery anodes
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2022 (engelsk)Inngår i: Journal of Materials Chemistry A, ISSN 2050-7488, E-ISSN 2050-7496, Vol. 10, nr 16, s. 9059-9066Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

The drawbacks of amorphous hard carbon are its low conductivity and structural instability, due to its large volume change and the occurrence of side reactions with the electrolyte during cycling. Here, we propose a simple and rapid method to address these disadvantages; we used an emulsion solvent-evaporation method to create hierarchically structured microparticles of hard carbon nanoparticles, derived from soot, and multi-walled-carbon-nanotubes at a very low threshold of 2.8 wt%. These shrub-ball like microparticles have well-defined void spaces between different nanostructures of carbon, leading to an increased surface area, lower charge-resistance and side reactions, and higher electronic conductivity for Na+ insertion and de-insertion. They can be slurry cast to assemble Na+ anodes, exhibiting an initial discharge capacity of 713.3 mA h g(-1) and showing long-term stability with 120.8 mA h g(-1) at 500 mA g(-1) after 500 cycles, thus outperforming neat hard carbon nanoparticles by an order of magnitude. Our work shows that hierarchical self-assembly is attractive for increasing the performance of microparticles used for battery production.

sted, utgiver, år, opplag, sider
Royal Society of Chemistry (RSC), 2022
HSV kategori
Identifikatorer
urn:nbn:se:kth:diva-311641 (URN)10.1039/d1ta10889a (DOI)000780328500001 ()2-s2.0-85127876353 (Scopus ID)
Merknad

QC 20220502

Tilgjengelig fra: 2022-05-02 Laget: 2022-05-02 Sist oppdatert: 2022-11-29bibliografisk kontrollert
Wei, X.-F., Hedenqvist, M. S., Zhao, L., Barth, A. & Yin, H. (2022). Risk for the release of an enormous amount of nanoplastics and microplastics from partially biodegradable polymer blends. Green Chemistry, 24(22), 8742-8750
Åpne denne publikasjonen i ny fane eller vindu >>Risk for the release of an enormous amount of nanoplastics and microplastics from partially biodegradable polymer blends
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2022 (engelsk)Inngår i: Green Chemistry, ISSN 1463-9262, E-ISSN 1463-9270, Vol. 24, nr 22, s. 8742-8750Artikkel i tidsskrift (Fagfellevurdert) Published
Abstract [en]

Nanoplastics and microplastics (NMPs) in natural environments are an emerging global concern and understanding their formation processes from macro-plastic items during degradation/weathering is critical for predicting their quantities and impacts in different ecological systems. Here, we show the risk of enormous emissions of NMPs from polymer blends, a source that has not been specifically studied, by taking immiscible (most common case) partially biodegradable polymer blends as an example. The blends have the common “sea-island” morphology, where the minor non-biodegradable polymer phase (polyethylene and polypropylene) is dispersed as NMP particles in the major continuous biodegradable matrix (poly(ϵ-caprolactone)). The dispersed NMP particles with spherical and rod-like shapes are gradually liberated and released to the surrounding aquatic environment during the biodegradation of the matrix polymer. Strikingly, the number of released NMPs from the blend is very high. The blend film surface erosion process, induced by enzymatic hydrolysis of the matrix, involving fragmentation, hole formation, and hole wall detachment, was systematically investigated to reveal the NMP release process. Our findings present direct evidence and detailed insights into the high risk of emissions of NMPs from partially biodegradable immiscible polymer blends with a widespread “sea-island” morphology. Efforts from authorities, developers, manufacturers, and the public are needed to avoid the use of non-biodegradable polymers in blends with biodegradable polymers. 

sted, utgiver, år, opplag, sider
Royal Society of Chemistry (RSC), 2022
Emneord
Biodegradable polymers, Biodegradation, Enzymatic hydrolysis, Morphology, Polymer blends, Polypropylenes, Biodegradable polymer blends, Ecological systems, Formation process, Islands morphology, matrix, Microplastic particles, Microplastics, Nanoplastics, Natural environments, Non-biodegradable polymers, Microplastic
HSV kategori
Identifikatorer
urn:nbn:se:kth:diva-328970 (URN)10.1039/d2gc02388a (DOI)000877641100001 ()2-s2.0-85141761825 (Scopus ID)
Merknad

QC 20230614

Tilgjengelig fra: 2023-06-14 Laget: 2023-06-14 Sist oppdatert: 2023-06-14bibliografisk kontrollert
Bettelli, M. A., Perdigón, L. A., Zhao, L., de Moura Pereira, P. F., Jimenez-Quero, A., Capezza, A. J., . . . Sabino, M. A.Biodegradation, Bioassimilation, and Recycling properties of Wheat Gluten-Based Foams: A step towards Sustainable Solutions.
Åpne denne publikasjonen i ny fane eller vindu >>Biodegradation, Bioassimilation, and Recycling properties of Wheat Gluten-Based Foams: A step towards Sustainable Solutions
Vise andre…
(engelsk)Manuskript (preprint) (Annet vitenskapelig)
HSV kategori
Identifikatorer
urn:nbn:se:kth:diva-352911 (URN)
Merknad

QC 20240910

Tilgjengelig fra: 2024-09-09 Laget: 2024-09-09 Sist oppdatert: 2024-09-16bibliografisk kontrollert
Zhao, L., Najjarzadeh, N., Guo, B. & Syrén, P.-O.Impact of oxygen on the regioselectivity of BVMOs.
Åpne denne publikasjonen i ny fane eller vindu >>Impact of oxygen on the regioselectivity of BVMOs
(engelsk)Manuskript (preprint) (Annet vitenskapelig)
Emneord
BVMOs; asymmetric ketone; regioselectivity; biocatalysis
HSV kategori
Forskningsprogram
Kemi
Identifikatorer
urn:nbn:se:kth:diva-360625 (URN)
Merknad

QC 20250303

Tilgjengelig fra: 2025-02-28 Laget: 2025-02-28 Sist oppdatert: 2025-03-11bibliografisk kontrollert
Zhao, L., Vang Høst, A. & Schnepel, C.Relaxing substrate specificity of N-acyltransferase from Pseudomonas aeruginosa for modular biocatalytic amide bond synthesis.
Åpne denne publikasjonen i ny fane eller vindu >>Relaxing substrate specificity of N-acyltransferase from Pseudomonas aeruginosa for modular biocatalytic amide bond synthesis
(engelsk)Manuskript (preprint) (Annet vitenskapelig)
Emneord
biocatalysis; amide bonds formation; enzyme engineering; green chemistry; acyl transferase
HSV kategori
Forskningsprogram
Kemi
Identifikatorer
urn:nbn:se:kth:diva-360624 (URN)
Merknad

QC 20250303

Tilgjengelig fra: 2025-02-28 Laget: 2025-02-28 Sist oppdatert: 2025-03-11bibliografisk kontrollert
Organisasjoner
Identifikatorer
ORCID-id: ORCID iD iconorcid.org/0009-0005-2901-1410