kth.sePublications KTH
Change search
Link to record
Permanent link

Direct link
Campoy Rodriguez, Adrian
Publications (2 of 2) Show all publications
Warrick, P. A., Lostanlen, V., Eickenberg, M., Homsi, M. N., Campoy Rodriguez, A. & Andén, J. (2022). Arrhythmia classification of 12-lead and reduced-lead electrocardiograms via recurrent networks, scattering, and phase harmonic correlation. Physiological Measurement, 43(9), Article ID 094002.
Open this publication in new window or tab >>Arrhythmia classification of 12-lead and reduced-lead electrocardiograms via recurrent networks, scattering, and phase harmonic correlation
Show others...
2022 (English)In: Physiological Measurement, ISSN 0967-3334, E-ISSN 1361-6579, Vol. 43, no 9, article id 094002Article in journal (Refereed) Published
Abstract [en]

We describe an automatic classifier of arrhythmias based on 12-lead and reduced-lead electrocardiograms. Our classifier comprises four modules: scattering transform (ST), phase harmonic correlation (PHC), depthwise separable convolutions (DSC), and a long short-term memory (LSTM) network. It is trained on PhysioNet/Computing in Cardiology Challenge 2021 data. The ST captures short-term temporal ECG modulations while the PHC characterizes the phase dependence of coherent ECG components. Both reduce the sampling rate to a few samples per typical heart beat. We pass the output of the ST and PHC to a depthwise-separable convolution layer (DSC) which combines lead responses separately for each ST or PHC coefficient and then combines resulting values across all coefficients. At a deeper level, two LSTM layers integrate local variations of the input over long time scales. We train in an end-to-end fashion as a multilabel classification problem with a normal and 25 arrhythmia classes. Lastly, we use canonical correlation analysis (CCA) for transfer learning from 12-lead ST and PHC representations to reduced-lead ones. After local cross-validation on the public data from the challenge, our team 'BitScattered' achieved the following results: 0.682 +/- 0.0095 for 12-lead; 0.666 +/- 0.0257 for 6-lead; 0.674 +/- 0.0185 for 4-lead; 0.661 +/- 0.0098 for 3-lead; and 0.662 +/- 0.0151 for 2-lead.

Place, publisher, year, edition, pages
IOP Publishing, 2022
Keywords
electrocardiography, scattering transform, phase harmonic correlation, canonical correlation analysis, convolutional neural networks, long short-term memory networks
National Category
Cardiology and Cardiovascular Disease
Identifiers
urn:nbn:se:kth:diva-319098 (URN)10.1088/1361-6579/ac77d1 (DOI)000852329400001 ()35688143 (PubMedID)2-s2.0-85138128248 (Scopus ID)
Note

QC 20220926

Available from: 2022-09-26 Created: 2022-09-26 Last updated: 2025-02-10Bibliographically approved
Warrick, P. A., Lostanlen, V., Eickenberg, M., Homsi, M. N., Rodriguez, A. C. & Andén, J. (2021). Arrhythmia Classification of Reduced-Lead Electrocardiograms by Scattering- Recurrent Networks. In: 2021 COMPUTING IN CARDIOLOGY (CINC): . Paper presented at Conference on Computing in Cardiology (CinC), 12-15 September, 2021, Brno, Czech Republic. Institute of Electrical and Electronics Engineers (IEEE)
Open this publication in new window or tab >>Arrhythmia Classification of Reduced-Lead Electrocardiograms by Scattering- Recurrent Networks
Show others...
2021 (English)In: 2021 COMPUTING IN CARDIOLOGY (CINC), Institute of Electrical and Electronics Engineers (IEEE) , 2021Conference paper, Published paper (Refereed)
Abstract [en]

We describe an automatic classijier ofarrythmias based on 12- lead and reduced-lead electrocardiograms. Our classijier composes the scattering transform (ST) and a long short-term memory (LSTM) network. It is trained on PhysioNet/Computing in Cardiology Challenge 2021 data. The ST captures short-term temporal ECG modulations while reducing its sampling rate to a few samples per typical heart beat. We pass the output of the ST to a depthwise-separable convolution layer which combines lead responses separately for each ST coefficient and then combines resulting values across ST coefficients. At a deeper level, 2 LSTM layers integrate local variations of the input over long time scales. We train in an end-to-end fashion as a multilabel classijication problem with a normal and 25 arrhythmia classes. We used canonical correlation analysis (CCA) for transfer learning from 12-lead ST representations to reduced-lead ones. For 12-, 6-, 4-, 3- and 2-leads, team "BitScattered" Challenge metrics on the hidden validation set were 0.46, 0.44, 0.45, 0.46 and 0.43; and on the hidden test set were 0.10,0.11,0.10,0.10 and 0.10, respectively, ranking 34th on the hidden test set.

Place, publisher, year, edition, pages
Institute of Electrical and Electronics Engineers (IEEE), 2021
Series
Computing in Cardiology Conference, ISSN 2325-8861
Keywords
Cardiology, Classification (of information), Diseases, Long short-term memory, Arrhythmia classification, Arrythmias, Automatic classifiers, Memory network, PhysioNet, Recurrent networks, Sampling rates, Scattering transforms, Test sets, Transform coefficients, Electrocardiography
National Category
Cardiology and Cardiovascular Disease Bioinformatics and Computational Biology
Identifiers
urn:nbn:se:kth:diva-315829 (URN)10.23919/CinC53138.2021.9662908 (DOI)000821955000197 ()2-s2.0-85124762505 (Scopus ID)
Conference
Conference on Computing in Cardiology (CinC), 12-15 September, 2021, Brno, Czech Republic
Note

Part of proceedings: ISBN 978-1-6654-7916-5

QC 20220721

Available from: 2022-07-21 Created: 2022-08-16 Last updated: 2025-02-10Bibliographically approved
Organisations

Search in DiVA

Show all publications