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Perez Ramirez, D. F., Pérez Penichet, C., Tsiftes, N., Voigt, T., Kostic, D. & Boman, M. (2023). DeepGANTT: A Scalable Deep Learning Scheduler for Backscatter Networks. In: IPSN 2023 - Proceedings of the 2023 22nd International Conference on Information Processing in Sensor Networks: . Paper presented at 22nd ACM/IEEE International Conference on Information Processing in Sensor Networks, IPSN 2023, San Antonio, United States of America, May 9 2023 - May 12 2023 (pp. 163-176). Association for Computing Machinery (ACM)
Open this publication in new window or tab >>DeepGANTT: A Scalable Deep Learning Scheduler for Backscatter Networks
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2023 (English)In: IPSN 2023 - Proceedings of the 2023 22nd International Conference on Information Processing in Sensor Networks, Association for Computing Machinery (ACM) , 2023, p. 163-176Conference paper, Published paper (Refereed)
Abstract [en]

Novel backscatter communication techniques enable battery-free sensor tags to interoperate with unmodified standard IoT devices, extending a sensor network's capabilities in a scalable manner. Without requiring additional dedicated infrastructure, the battery-free tags harvest energy from the environment, while the IoT devices provide them with the unmodulated carrier they need to communicate. A schedule coordinates the provision of carriers for the communications of battery-free devices with IoT nodes. Optimal carrier scheduling is an NP-hard problem that limits the scalability of network deployments. Thus, existing solutions waste energy and other valuable resources by scheduling the carriers suboptimally. We present DeepGANTT, a deep learning scheduler that leverages graph neural networks to efficiently provide near-optimal carrier scheduling. We train our scheduler with optimal schedules of relatively small networks obtained from a constraint optimization solver, achieving a performance within 3% of the optimum. Without the need to retrain, our scheduler generalizes to networks 6 × larger in the number of nodes and 10 × larger in the number of tags than those used for training. DeepGANTT breaks the scalability limitations of the optimal scheduler and reduces carrier utilization by up to compared to the state-of-the-art heuristic. As a consequence, our scheduler efficiently reduces energy and spectrum utilization in backscatter networks.

Place, publisher, year, edition, pages
Association for Computing Machinery (ACM), 2023
Keywords
combinatorial optimization, machine learning, scheduling, wireless backscatter communications
National Category
Communication Systems
Identifiers
urn:nbn:se:kth:diva-338648 (URN)10.1145/3583120.3586957 (DOI)001112123000013 ()2-s2.0-85160025874 (Scopus ID)
Conference
22nd ACM/IEEE International Conference on Information Processing in Sensor Networks, IPSN 2023, San Antonio, United States of America, May 9 2023 - May 12 2023
Note

Part of ISBN 9798400701184

QC 20231023

Available from: 2023-10-23 Created: 2023-10-23 Last updated: 2024-03-12Bibliographically approved
Boberg, J., Kaldo, V., Mataix-Cols, D., Crowley, J. J., Roelstraete, B., Halvorsen, M., . . . Rück, C. (2023). Swedish multimodal cohort of patients with anxiety or depression treated with internet-delivered psychotherapy (MULTI-PSYCH). BMJ Open, 13(10), Article ID e069427.
Open this publication in new window or tab >>Swedish multimodal cohort of patients with anxiety or depression treated with internet-delivered psychotherapy (MULTI-PSYCH)
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2023 (English)In: BMJ Open, E-ISSN 2044-6055, Vol. 13, no 10, article id e069427Article in journal (Refereed) Published
Abstract [en]

Purpose Depression and anxiety afflict millions worldwide causing considerable disability. MULTI-PSYCH is a longitudinal cohort of genotyped and phenotyped individuals with depression or anxiety disorders who have undergone highly structured internet-based cognitive-behaviour therapy (ICBT). The overarching purpose of MULTI-PSYCH is to improve risk stratification, outcome prediction and secondary preventive interventions. MULTI-PSYCH is a precision medicine initiative that combines clinical, genetic and nationwide register data. Participants MULTI-PSYCH includes 2668 clinically well-characterised adults with major depressive disorder (MDD) (n=1300), social anxiety disorder (n=640) or panic disorder (n=728) assessed before, during and after 12 weeks of ICBT at the internet psychiatry clinic in Stockholm, Sweden. All patients have been blood sampled and genotyped. Clinical and genetic data have been linked to several Swedish registers containing a wide range of variables from patient birth up to 10 years after the end of ICBT. These variable types include perinatal complications, school grades, psychiatric and somatic comorbidity, dispensed medications, medical interventions and diagnoses, healthcare and social benefits, demographics, income and more. Long-term follow-up data will be collected through 2029. Findings to date Initial uses of MULTI-PSYCH include the discovery of an association between PRS for autism spectrum disorder and response to ICBT, the development of a machine learning model for baseline prediction of remission status after ICBT in MDD and data contributions to genome wide association studies for ICBT outcome. Other projects have been launched or are in the planning phase. Future plans The MULTI-PSYCH cohort provides a unique infrastructure to study not only predictors or short-term treatment outcomes, but also longer term medical and socioeconomic outcomes in patients treated with ICBT for depression or anxiety. MULTI-PSYCH is well positioned for research collaboration.

Place, publisher, year, edition, pages
BMJ, 2023
Keywords
Anxiety disorders, Depression & mood disorders, EPIDEMIOLOGY, GENETICS
National Category
Psychiatry
Identifiers
urn:nbn:se:kth:diva-338882 (URN)10.1136/bmjopen-2022-069427 (DOI)001081277700003 ()37793927 (PubMedID)2-s2.0-85173654320 (Scopus ID)
Note

QC 20231031

Available from: 2023-10-31 Created: 2023-10-31 Last updated: 2024-05-02Bibliographically approved
Tate, A. E., Akingbuwa, W. A., Karlsson, R., Hottenga, J.-J., Pool, R., Boman, M., . . . Kuja-Halkola, R. (2022). A genetically informed prediction model for suicidal and aggressive behaviour in teens. Translational Psychiatry, 12(1), Article ID 488.
Open this publication in new window or tab >>A genetically informed prediction model for suicidal and aggressive behaviour in teens
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2022 (English)In: Translational Psychiatry, E-ISSN 2158-3188, Vol. 12, no 1, article id 488Article in journal (Refereed) Published
Abstract [en]

Suicidal and aggressive behaviours cause significant personal and societal burden. As risk factors associated with these behaviours frequently overlap, combined approaches in predicting the behaviours may be useful in identifying those at risk for either. The current study aimed to create a model that predicted if individuals will exhibit suicidal behaviour, aggressive behaviour, both, or neither in late adolescence. A sample of 5,974 twins from the Child and Adolescent Twin Study in Sweden (CATSS) was broken down into a training (80%), tune (10%) and test (10%) set. The Netherlands Twin Register (NTR; N = 2702) was used for external validation. Our longitudinal data featured genetic, environmental, and psychosocial predictors derived from parental and self-report data. A stacked ensemble model was created which contained a gradient boosted machine, random forest, elastic net, and neural network. Model performance was transferable between CATSS and NTR (macro area under the receiver operating characteristic curve (AUC) [95% CI] AUCCATSS(test set) = 0.709 (0.671-0.747); AUCNTR = 0.685 (0.656-0.715), suggesting model generalisability across Northern Europe. The notable exception is suicidal behaviours in the NTR, which was no better than chance. The 25 highest scoring variable importance scores for the gradient boosted machines and random forest models included self-reported psychiatric symptoms in mid-adolescence, sex, and polygenic scores for psychiatric traits. The model's performance is comparable to current prediction models that use clinical interviews and is not yet suitable for clinical use. Moreover, genetic variables may have a role to play in predictive models of adolescent psychopathology.

Place, publisher, year, edition, pages
Springer Nature, 2022
National Category
Psychiatry
Identifiers
urn:nbn:se:kth:diva-322362 (URN)10.1038/s41398-022-02245-w (DOI)000886205000002 ()36411277 (PubMedID)2-s2.0-85142290343 (Scopus ID)
Note

QC 20221212

Available from: 2022-12-12 Created: 2022-12-12 Last updated: 2024-01-17Bibliographically approved
Corcoran, D., Kreuger, P. & Boman, M. (2022). A Sample Efficient Multi-Agent Approach to Continuous Reinforcement Learning. In: Charalambides, M Papadimitriou, P Cerroni, W Kanhere, S Mamatas, L (Ed.), 2022 18Th International Conference On Network And Service Management (CNSM 2022): INTELLIGENT MANAGEMENT OF DISRUPTIVE NETWORK TECHNOLOGIES AND SERVICES. Paper presented at 18th International Conference on Network and Service Management (CNSM) - Intelligent Management of Disruptive Network Technologies and Services, OCT 31-NOV 04, 2022, Thessaloniki, GREECE (pp. 338-344). IEEE
Open this publication in new window or tab >>A Sample Efficient Multi-Agent Approach to Continuous Reinforcement Learning
2022 (English)In: 2022 18Th International Conference On Network And Service Management (CNSM 2022): INTELLIGENT MANAGEMENT OF DISRUPTIVE NETWORK TECHNOLOGIES AND SERVICES / [ed] Charalambides, M Papadimitriou, P Cerroni, W Kanhere, S Mamatas, L, IEEE , 2022, p. 338-344Conference paper, Published paper (Refereed)
Abstract [en]

As design, deployment and operation complexity increase in mobile systems, adaptive self-learning techniques have become essential enablers in mitigation and control of the complexity problem. Artificial intelligence and, in particular, reinforcement learning has shown great potential in learning complex tasks through observations. The majority of ongoing reinforcement learning research activities focus on single-agent problem settings with an assumption of accessibility to a globally observable state and action space. In many real-world settings, such as LTE or 5G, decision making is distributed and there is often only local accessibility to the state space. In such settings, multi-agent learning may be preferable, with the added challenge of ensuring that all agents collaboratively work towards achieving a common goal. We present a novel cooperative and distributed actor-critic multi-agent reinforcement learning algorithm. We claim the approach is sample efficient, both in terms of selecting observation samples and in terms of assignment of credit between subsets of collaborating agents.

Place, publisher, year, edition, pages
IEEE, 2022
Series
International Conference on Network and Service Management, ISSN 2165-9605
Keywords
Machine learning, Radio resource scheduling
National Category
Computer Sciences Computer graphics and computer vision
Identifiers
urn:nbn:se:kth:diva-323581 (URN)10.23919/CNSM55787.2022.9965060 (DOI)000903721000044 ()2-s2.0-85143886726 (Scopus ID)
Conference
18th International Conference on Network and Service Management (CNSM) - Intelligent Management of Disruptive Network Technologies and Services, OCT 31-NOV 04, 2022, Thessaloniki, GREECE
Note

Part of proceedings: ISBN 978-3-903176-51-5, QC 20230208

Available from: 2023-02-08 Created: 2023-02-08 Last updated: 2025-02-01Bibliographically approved
Ruiz, N. R., Abd Own, S., Smedby, K. E., Eloranta, S., Koch, S., Wasterlid, T., . . . Boman, M. (2022). Data-driven support to decision-making in molecular tumour boards for lymphoma: A design science approach. Frontiers in Oncology, 12, Article ID 984021.
Open this publication in new window or tab >>Data-driven support to decision-making in molecular tumour boards for lymphoma: A design science approach
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2022 (English)In: Frontiers in Oncology, E-ISSN 2234-943X, Vol. 12, article id 984021Article in journal (Refereed) Published
Abstract [en]

Background: The increasing amount of molecular data and knowledge about genomic alterations from next-generation sequencing processes together allow for a greater understanding of individual patients, thereby advancing precision medicine. Molecular tumour boards feature multidisciplinary teams of clinical experts who meet to discuss complex individual cancer cases. Preparing the meetings is a manual and time-consuming process. Purpose: To design a clinical decision support system to improve the multimodal data interpretation in molecular tumour board meetings for lymphoma patients at Karolinska University Hospital, Stockholm, Sweden. We investigated user needs and system requirements, explored the employment of artificial intelligence, and evaluated the proposed design with primary stakeholders. Methods: Design science methodology was used to form and evaluate the proposed artefact. Requirements elicitation was done through a scoping review followed by five semi-structured interviews. We used UML Use Case diagrams to model user interaction and UML Activity diagrams to inform the proposed flow of control in the system. Additionally, we modelled the current and future workflow for MTB meetings and its proposed machine learning pipeline. Interactive sessions with end-users validated the initial requirements based on a fictive patient scenario which helped further refine the system. Results: The analysis showed that an interactive secure Web-based information system supporting the preparation of the meeting, multidisciplinary discussions, and clinical decision-making could address the identified requirements. Integrating artificial intelligence via continual learning and multimodal data fusion were identified as crucial elements that could provide accurate diagnosis and treatment recommendations. Impact: Our work is of methodological importance in that using artificial intelligence for molecular tumour boards is novel. We provide a consolidated proof-of-concept system that could support the end-to-end clinical decision-making process and positively and immediately impact patients. Conclusion: Augmenting a digital decision support system for molecular tumour boards with retrospective patient material is promising. This generates realistic and constructive material for human learning, and also digital data for continual learning by data-driven artificial intelligence approaches. The latter makes the future system adaptable to human bias, improving adequacy and decision quality over time and over tasks, while building and maintaining a digital log.

Place, publisher, year, edition, pages
Frontiers Media SA, 2022
Keywords
precision medicine, next-generation sequencing, molecular tumour board, clinical decision support system, artificial intelligence, multimodal data, lymphoma
National Category
Cancer and Oncology Bioinformatics (Computational Biology)
Identifiers
urn:nbn:se:kth:diva-322857 (URN)10.3389/fonc.2022.984021 (DOI)000892257300001 ()36457495 (PubMedID)2-s2.0-85143118784 (Scopus ID)
Note

QC 20230109

Available from: 2023-01-09 Created: 2023-01-09 Last updated: 2024-01-17Bibliographically approved
Behravesh, R., Rao, A., Perez-Ramirez, D. F., Harutyunyan, D., Riggio, R. & Boman, M. (2022). Machine Learning at the Mobile Edge: The Case of Dynamic Adaptive Streaming Over HTTP (DASH). IEEE Transactions on Network and Service Management, 19(4), 4779-4793
Open this publication in new window or tab >>Machine Learning at the Mobile Edge: The Case of Dynamic Adaptive Streaming Over HTTP (DASH)
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2022 (English)In: IEEE Transactions on Network and Service Management, E-ISSN 1932-4537, Vol. 19, no 4, p. 4779-4793Article in journal (Refereed) Published
Abstract [en]

Dynamic Adaptive Streaming over HTTP (DASH) is a standard for delivering video in segments and adapting each segment's bitrate (quality), to adjust to changing and limited network bandwidth. We study segment prefetching, informed by machine learning predictions of bitrates of client segment requests, implemented at the network edge. We formulate this client segment request prediction problem as a supervised learning problem of predicting the bitrate of a client's next segment request, in order to prefetch it at the mobile edge, with the objective of jointly improving the video streaming experience for the users and network bandwidth utilization for the service provider. The results of extensive evaluations showed a segment request prediction accuracy of close to 90% and reduced video segment access delay with a cache hit ratio of 58%, and reduced transport network load by lowering the backhaul link utilization by 60.91%.

Place, publisher, year, edition, pages
Institute of Electrical and Electronics Engineers (IEEE), 2022
Keywords
Streaming media, Bit rate, Prefetching, Servers, Measurement, Bandwidth, Prediction algorithms, Video streaming, DASH, caching, machine learning, MEC, 5G
National Category
Computer Sciences
Identifiers
urn:nbn:se:kth:diva-324906 (URN)10.1109/TNSM.2022.3193856 (DOI)000965284400001 ()2-s2.0-85135765992 (Scopus ID)
Note

QC 20230920

Available from: 2023-03-21 Created: 2023-03-21 Last updated: 2025-08-25Bibliographically approved
Wallert, J., Boberg, J., Kaldo, V., Roelstraete, B., Crowley, J., Halvorsen, M., . . . Ruck, C. (2022). MULTI-PSYCH - A MULTIMODAL DATA PROJECT FOR DEPRESSION AND ANXIETY DISORDERS IN SWEDISH ROUTINE CLINICAL CARE. Paper presented at World Congress of Psychiatric Genetics (WCPG), SEP 13-17, 2022, Florence, ITALY. European Neuropsychopharmacology, 63, E138-E139
Open this publication in new window or tab >>MULTI-PSYCH - A MULTIMODAL DATA PROJECT FOR DEPRESSION AND ANXIETY DISORDERS IN SWEDISH ROUTINE CLINICAL CARE
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2022 (English)In: European Neuropsychopharmacology, ISSN 0924-977X, E-ISSN 1873-7862, Vol. 63, p. E138-E139Article in journal, Meeting abstract (Other academic) Published
Place, publisher, year, edition, pages
ELSEVIER, 2022
National Category
Psychiatry
Identifiers
urn:nbn:se:kth:diva-324645 (URN)000898874200030 ()
Conference
World Congress of Psychiatric Genetics (WCPG), SEP 13-17, 2022, Florence, ITALY
Note

QC 20230309

Available from: 2023-03-09 Created: 2023-03-09 Last updated: 2023-03-09Bibliographically approved
Wallert, J., Boberg, J., Kaldo, V., Mataix-Cols, D., Flygare, O., Crowley, J. J., . . . Ruck, C. (2022). Predicting remission after internet-delivered psychotherapy in patients with depression using machine learning and multi-modal data. Translational Psychiatry, 12(1), Article ID 357.
Open this publication in new window or tab >>Predicting remission after internet-delivered psychotherapy in patients with depression using machine learning and multi-modal data
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2022 (English)In: Translational Psychiatry, E-ISSN 2158-3188, Vol. 12, no 1, article id 357Article in journal (Refereed) Published
Abstract [en]

This study applied supervised machine learning with multi-modal data to predict remission of major depressive disorder {MDD) after psychotherapy. Genotyped adult patients (n = 894, 65.5% women, age 18-75 years) diagnosed with mild-to-moderate MDD and treated with guided Internet-based Cognitive Behaviour Therapy (ICBT) at the Internet Psychiatry Clinic in Stockholm were included (2008-2016). Predictor types were demographic, clinical, process (e.g., time to complete online questionnaires), and genetic (polygenic risk scores). Outcome was remission status post ICBT (cut-off <= 10 on MADRS-S). Data were split into train (60%) and validation (40%) given ICBT start date. Predictor selection employed human expertise followed by recursive feature elimination. Model derivation was internally validated through cross-validation. The final random forest model was externally validated against a (i) null, (ii) logit, (iii) XGBoost, and {iv) blended meta-ensemble model on the hold-out validation set. Feature selection retained 45 predictors representing all four predictor types. With unseen validation data, the final random forest model proved reasonably accurate at classifying post ICBT remission (Accuracy 0.656 [0.604, 0.705], P vs null model = 0.004; AUC 0.687 [0.631, 0.743]), slightly better vs logit (bootstrap D = 1.730, P = 0.084) but not vs XGBoost (D = 0.463, P = 0.643). Transparency analysis showed model usage of all predictor types at both the group and individual patient level. A new, multi-modal classifier for predicting MDD remission status after ICBT treatment in routine psychiatric care was derived and empirically validated. The multi-modal approach to predicting remission may inform tailored treatment, and deserves further investigation to attain clinical usefulness.

Place, publisher, year, edition, pages
Springer Nature, 2022
National Category
Neurology
Identifiers
urn:nbn:se:kth:diva-318179 (URN)10.1038/s41398-022-02133-3 (DOI)000848751800003 ()36050305 (PubMedID)2-s2.0-85137074379 (Scopus ID)
Note

QC 20220916

Available from: 2022-09-16 Created: 2022-09-16 Last updated: 2024-07-23Bibliographically approved
Eloranta, S. & Boman, M. (2022). Predictive models for clinical decision making: Deep dives in practical machine learning. Journal of Internal Medicine, 292(2), 278-295
Open this publication in new window or tab >>Predictive models for clinical decision making: Deep dives in practical machine learning
2022 (English)In: Journal of Internal Medicine, ISSN 0954-6820, E-ISSN 1365-2796, Vol. 292, no 2, p. 278-295Article in journal (Refereed) Published
Abstract [en]

The deployment of machine learning for tasks relevant to complementing standard of care and advancing tools for precision health has gained much attention in the clinical community, thus meriting further investigations into its broader use. In an introduction to predictive modelling using machine learning, we conducted a review of the recent literature that explains standard taxonomies, terminology and central concepts to a broad clinical readership. Articles aimed at readers with little or no prior experience of commonly used methods or typical workflows were summarised and key references are highlighted. Continual interdisciplinary developments in data science, biostatistics and epidemiology also motivated us to further discuss emerging topics in predictive and data-driven (hypothesis-less) analytics with machine learning. Through two methodological deep dives using examples from precision psychiatry and outcome prediction after lymphoma, we highlight how the use of, for example, natural language processing can outperform established clinical risk scores and aid dynamic prediction and adaptive care strategies. Such realistic and detailed examples allow for critical analysis of the importance of new technological advances in artificial intelligence for clinical decision-making. New clinical decision support systems can assist in prevention and care by leveraging precision medicine. 

Place, publisher, year, edition, pages
Wiley, 2022
Keywords
artificial intelligence, clinical decision-making, machine learning, physician, precision medicine, bioinformatics, biostatistics, clinical decision making, clinical decision support system, clinical outcome, clinical research, data science, human, learning algorithm, lymphoma, medical genetics, natural language processing, personalized medicine, prediction, predictive model, psychiatry, psychology, Review, risk assessment, statistical reasoning, survival analysis, workflow, procedures, Decision Support Systems, Clinical, Humans
National Category
Clinical Medicine Computer graphics and computer vision
Identifiers
urn:nbn:se:kth:diva-323269 (URN)10.1111/joim.13483 (DOI)000786597900001 ()35426190 (PubMedID)2-s2.0-85128660195 (Scopus ID)
Note

QC 20230124

Available from: 2023-01-24 Created: 2023-01-24 Last updated: 2025-02-01Bibliographically approved
Fletcher-Sandersjoo, A., Tatter, C., Yang, L., Ponten, E., Boman, M., Lassaren, P., . . . Thelin, E. P. (2022). Stockholm score of lesion detection on computed tomography following mild traumatic brain injury (SELECT-TBI): study protocol for a multicentre, retrospective, observational cohort study. BMJ Open, 12(9), Article ID e060679.
Open this publication in new window or tab >>Stockholm score of lesion detection on computed tomography following mild traumatic brain injury (SELECT-TBI): study protocol for a multicentre, retrospective, observational cohort study
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2022 (English)In: BMJ Open, E-ISSN 2044-6055, Vol. 12, no 9, article id e060679Article in journal (Refereed) Published
Abstract [en]

Introduction Mild traumatic brain injury (mTBI) is one of the most common reasons for emergency department (ED) visits. A portion of patients with mTBI will develop an intracranial lesion that might require medical or surgical intervention. In these patients, swift diagnosis and management is paramount. Several guidelines have been developed to help direct patients with mTBI for head CT scanning, but they lack specificity, do not consider the interactions between risk factors and do not provide an individualised estimate of intracranial lesion risk. The aim of this study is to create a model that estimates individualised intracranial lesion risks in patients with mTBI who present to the ED. Methods and analysis This will be a retrospective cohort study conducted at ED hospitals in Stockholm, Sweden. Eligible patients are adults (>= 15 years) with mTBI who presented to the ED within 24 hours of injury and performed a CT scan. The primary outcome will be a traumatic lesion on head CT. The secondary outcomes will be any clinically significant lesion, defined as an intracranial finding that led to neurosurgical intervention, hospital admission >= 48 hours due to TBI or death due to TBI. Machine-learning models will be applied to create scores predicting the primary and secondary outcomes. An estimated 20 000 patients will be included. Ethics and dissemination The study has been approved by the Swedish Ethical Review Authority (Dnr: 2020-05728). The research findings will be disseminated through peer-reviewed scientific publications and presentations at international conferences.

Place, publisher, year, edition, pages
BMJ, 2022
Keywords
NEUROSURGERY, ACCIDENT & EMERGENCY MEDICINE, Neuroradiology, Neurological injury, Computed tomography
National Category
Production Engineering, Human Work Science and Ergonomics Infectious Medicine Geriatrics
Identifiers
urn:nbn:se:kth:diva-319545 (URN)10.1136/bmjopen-2021-060679 (DOI)000853434200054 ()36581962 (PubMedID)2-s2.0-85137888331 (Scopus ID)
Note

QC 20221005

Available from: 2022-10-05 Created: 2022-10-05 Last updated: 2023-08-28Bibliographically approved
Organisations
Identifiers
ORCID iD: ORCID iD iconorcid.org/0000-0001-7949-1815

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