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Caprin-1 binding to the critical stress granule protein G3BP1 is influenced by pH
Karolinska Inst, Dept Med Solna, Sci Life Lab, S-17177 Stockholm, Sweden.;Karolinska Univ Hosp, Div Infect Dis, S-17177 Stockholm, Sweden..
Karolinska Inst, Dept Microbiol Tumor & Cell Biol, S-17177 Stockholm, Sweden..
Karolinska Inst, Dept Med Solna, Sci Life Lab, S-17177 Stockholm, Sweden.;Karolinska Univ Hosp, Div Infect Dis, S-17177 Stockholm, Sweden..ORCID iD: 0000-0003-0879-4119
Karolinska Inst, Dept Microbiol Tumor & Cell Biol, S-17177 Stockholm, Sweden..
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2023 (English)In: Open Biology, E-ISSN 2046-2441, Vol. 13, no 5, article id 220369Article in journal (Refereed) Published
Abstract [en]

G3BP is the central node within stress-induced protein-RNA interaction networks known as stress granules (SGs). The SG-associated proteins Caprin-1 and USP10 bind mutually exclusively to the NTF2 domain of G3BP1, promoting and inhibiting SG formation, respectively. Herein, we present the crystal structure of G3BP1-NTF2 in complex with a Caprin-1-derived short linear motif (SLiM). Caprin-1 interacts with His-31 and His-62 within a third NTF2-binding site outside those covered by USP10, as confirmed using biochemical and biophysical-binding assays. Nano-differential scanning fluorimetry revealed reduced thermal stability of G3BP1-NTF2 at acidic pH. This destabilization was counterbalanced significantly better by bound USP10 than Caprin-1. The G3BP1/USP10 complex immunoprecipated from human U2OS cells was more resistant to acidic buffer washes than G3BP1/Caprin-1. Acidification of cellular condensates by approximately 0.5 units relative to the cytosol was detected by ratiometric fluorescence analysis of pHluorin2 fused to G3BP1. Cells expressing a Caprin-1/FGDF chimera with higher G3BP1-binding affinity had reduced Caprin-1 levels and slightly reduced condensate sizes. This unexpected finding may suggest that binding of the USP10-derived SLiM to NTF2 reduces the propensity of G3BP1 to enter condensates.

Place, publisher, year, edition, pages
The Royal Society , 2023. Vol. 13, no 5, article id 220369
Keywords [en]
stress granule, G3BP, caprin-1, crystal structure, condensate, pH
National Category
Biochemistry Molecular Biology
Identifiers
URN: urn:nbn:se:kth:diva-328289DOI: 10.1098/rsob.220369ISI: 000984747000003PubMedID: 37161291Scopus ID: 2-s2.0-85159669448OAI: oai:DiVA.org:kth-328289DiVA, id: diva2:1763230
Note

QC 20230607

Available from: 2023-06-07 Created: 2023-06-07 Last updated: 2026-03-24Bibliographically approved

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Olsson, AndersNilvebrant, JohanGiang, Kim AnhNygren, Per-Åke

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