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Decoding gait in individuals with spinal cord injury: From explainable AI to predictive simulations
KTH, School of Engineering Sciences (SCI), Engineering Mechanics, Aerospace, moveability and naval architecture. (KTH MoveAbility)ORCID iD: 0000-0003-4571-1984
2026 (English)Doctoral thesis, comprehensive summary (Other academic)
Sustainable development
SDG 3: Good Health and Well-Being, SDG 10: Reduced inequalities
Abstract [en]

While current biomechanics research based on normal models and assumptions of normalcy has substantial merit, it fails to reliably describe individuals with impairments. Spinal cord injury (SCI), whether traumatic or nontraumatic, can partially or completely damage sensorimotor pathways, leading to heterogeneous gait abnormalities. A substantial knowledge gap exists regarding biomechanical and neurological movement strategies in this population due to complex, interacting factors including age, weight, time since injury, pain, sensorimotor impairment, and spasticity. The ASIA Impairment Scale, while recommended for classifying injury severity, was not designed to characterize individual ambulatory capacity. Other standardized assessments based on subjective ratings or timing/distance measures have limited ability to characterize functional capacity in this population comprehensively.

This thesis therefore aims to create computational frameworks for studying walking strategies in individuals with SCI, particularly incomplete SCI (iSCI), through two complementary approaches: developing machine learning algorithms that link individual characteristics to gait outcomes, and individualizing objective functions and constraints in predictive simulations using neuromusculoskeletal modeling.

Study I proposed and evaluated a framework applying Gaussian Process Regression and SHapley Additive exPlanations (SHAP) to quantify how neurological impairments and other demographic and anthropometric factors contribute to walking speed and net Oxygen cost during a six-minute walk test. Individual SHAP analyses quantified how these factors influenced walking performance for each participant, informing personalized rehabilitation targeting areas with the most potential for improvement.

Study II stratified gait heterogeneity in individuals with iSCI by deriving clusters with similar gait patterns without a priori parameter identification and assessed clinical correlations within the derived clusters. Six distinct gait clusters were identified and characterized among 280 iSCI gait cycles, informing more individualized rehabilitation.

Study III characterized margin of stability, temporospatial parameters, and joint mechanics in four iSCI subgroups from Study II compared to participants without disability, identifying how gait adaptations evolve as muscle weakness affects major muscle groups. Gait patterns remained normal with isolated mild plantarflexor weakness but deteriorated with combined hip muscle weakness and severe plantarflexor weakness.

Study IV developed a bilevel optimization framework using Bayesian optimization to automatically identify optimal objective weights for predictive gait simulations in individuals with iSCI. Tested on one female participant with asymmetric muscle weakness, the framework successfully automated weight identification in 9-12 days and demonstrated that simulations with optimized weights outperformed literature-based reference weights for predicting kinematics, kinetics, and ground reaction forces, showing promise for systematically exploring personalized compensatory gait strategies with predictive simulations.

These findings demonstrate the potential of advanced data-driven and simulation techniques to address gait complexity in individuals with SCI, with broader applicability to other clinical populations.

Abstract [sv]

Även om nuvarande biomekanikforskning baserad på normala modeller och antaganden om normalitet har betydande förtjänster, misslyckas den med att på ett tillförlitligt sätt beskriva individer med funktionsnedsättningar under normativ funktion. Ryggmärgsskada (SCI), vare sig traumatisk eller icke-traumatisk (nontraumatisk), kan delvis eller fullständigt skada sensomotoriska banor, vilket leder till heterogena gångavvikelser. Det finns en betydande kunskapslucka gällande biomekaniska och neurologiska rörelsestrategier i denna population på grund av komplexa, interagerande faktorer inklusive ålder, vikt, tid sedan skada, smärta, sensomotorisk funktionsnedsättning och spasticitet. ASIA Impairment Scale, även om den rekommenderas för klassificering av skadans svårighetsgrad, utformades inte för att karakterisera individuell ambulatorisk kapacitet. Andra standardiserade bedömningar baserade på subjektiva skattningar eller tid-/distansmått har likaså begränsad förmåga att på ett heltäckande sätt karaktärisera funktionell kapacitet i denna population.

Den här avhandlingen syftar därför till att skapa sådana beräkningsmässiga ramverk för att studera gångstrategier hos individer med SCI, i synnerhet inkomplett SCI (iSCI), genom två kompletterande tillvägagångssätt: att utveckla maskininlärningsalgoritmer som kopplar individuella egenskaper till gångutfall, och att individualisera målfunktioner och optimeringsvillkor i prediktiva simuleringar genom neuromuskuloskeletal modellering.

Studie I föreslog och utvärderade ett ramverk som tillämpade Gaussisk Processregression och SHapley Additive exPlanations (SHAP) för att kvantifiera hur neurologiska funktionsnedsättningar och andra demografiska och antropometriska faktorer bidrar till gånghastighet och netto syrgaskostnad under ett sex-minuters gångtest. Individuella SHAP-analyser kvantifierade hur dessa faktorer påverkade gångprestationen för varje deltagare, vilket informerade personlig rehabilitering riktad mot områden med störst potential för förbättring.

Studie II stratifierade gångheterogenitet hos individer med iSCI genom att härleda kluster med liknande gångmönster utan a priori parameteridentifiering och bedömde kliniska korrelationer inom de härledda klustren. Sex distinkta gångkluster identifierades och karakteriserades bland 280 iSCI-gångcykler, vilket representerar ett första steg mot individualiserade rehabiliteringsprogram.

Studie III karakteriserade stabilitetsmarginal, temporospatiala parametrar och ledmekanik i fyra iSCI-undergrupper från Studie II jämfört med en kontrollgrupp, och identifierade hur gånganpassningar utvecklas när muskelsvaghet progressivt påverkar större muskelgrupper. Gångmönstren förblev normala vid isolerad mild plantarflexorsvaghet men försämrades med kombinerad höftmuskelsvaghet och allvarlig plantarflexorsvaghet.

Studie IV utvecklade ett optimeringsramverk som fungerar på två nivåer. Ramverket använder Bayesiansk optimering för att automatiskt  identifiera optimala objektivvikter för prediktiva gångsimuleringar hos individer med iSCI. Vid testning på en kvinnlig deltagare med asymmetrisk muskelsvaghet lyckades ramverket automatisera viktidentifiering på 9-12 dagar och visade att optimala vikter presterade bättre än standardinställningar från litteraturen för att förutsäga kinematik, kinetik och markreaktionskrafter, vilket visar lovande potential för att systematiskt utforska personliga kompensatoriska gångstrategier med prediktiva simuleringar.

Dessa fynd demonstrerar potentialen hos avancerade datadrivna och simuleringsbaserade tekniker för att adressera gångkomplexitet hos individer med SCI, med bredare tillämplighet på andra kliniska populationer.

Place, publisher, year, edition, pages
Stockholm: KTH Royal Institute of Technology, 2026. , p. 201
Series
TRITA-SCI-FOU ; 2025:64
Keywords [en]
gait analysis, pathological gait, biomechanics, health informatics, metabolic cost, unsupervised learning, nonparametric regression, shapley addictive explanations, simulation, optimization, numerical modeling
Keywords [sv]
gånganalys, patologisk gång, biomekanik, hälsoinformatik, metabolisk kostnad, oövervakad inlärning, simulering, optimering, numerisk modellering
National Category
Medical and Health Sciences Neurosciences Rehabilitation Medicine
Research subject
Engineering Mechanics
Identifiers
URN: urn:nbn:se:kth:diva-375350ISBN: 978-91-8106-469-8 (print)OAI: oai:DiVA.org:kth-375350DiVA, id: diva2:2027381
Public defence
2026-02-06, https://kth-se.zoom.us/j/62776302499, Kollegiesalen, Brinellvägen 8, Stockholm, 09:00 (English)
Opponent
Supervisors
Funder
Swedish Research Council, 2018-00750Promobilia foundation, 18200, 22300, 23300
Note

QC 20260113

Available from: 2026-01-13 Created: 2026-01-12 Last updated: 2026-02-16Bibliographically approved
List of papers
1. Quantifying Demographic, Anthropometric, and Neurological Impairment Effects on Walking Performance in People with Spinal Cord Injury
Open this publication in new window or tab >>Quantifying Demographic, Anthropometric, and Neurological Impairment Effects on Walking Performance in People with Spinal Cord Injury
2025 (English)In: IEEE transactions on neural systems and rehabilitation engineering, ISSN 1534-4320, E-ISSN 1558-0210, Vol. 33, p. 4422-4431Article in journal (Refereed) Published
Abstract [en]

Spinal cord injury (SCI) can impair sensorimotor pathways and reduce walking ability. The effects of sensorimotor impairments are complex, as they interact with other factors such as age, pain, injury level, and injury severity. Traditional regression analyses have been used to describe relationships, but they frequently assume linearity. Explainable AI methods such as SHapley Additive ex-Planations (SHAP), based on cooperative game theory, can reveal feature importance globally and locally. Gaussian Process Regression (GPR) can handle limited datasets, a common challenge in observational clinical studies with small sample sizes. In this study, we proposed and evaluated a framework applying GPR and SHAP to quantify how neurological impairments and other factors, including muscle strength, sensory function, age, pain, spasticity, etc., contribute to walking performance, specifically walking speed and net oxygen cost during a six-minute walk test. This approach estimates each factor’s contribution both on a group level and for each individual. Thirty four adults with SCI underwent a clinical assessment and the six-minute walk test with preferred walking aids if relevant. Muscle strength was the most influential factor in both walking speed and net oxygen cost. Male sex, lower age, and less pain were associated with increased walking speed. More pain, higher body mass index, and higher sensory score were associated with lower net oxygen cost. Spasticity, injury level and sensory injury levels had relatively small influence on either outcome measure. Individual SHAP analyses quantified how neurological factors influenced walking performance for each participant. We demonstrate how nonparametric regression and explainable AI provide insights into the complex neurological factors affecting walking ability in persons with SCI.

Place, publisher, year, edition, pages
Institute of Electrical and Electronics Engineers (IEEE), 2025
Keywords
Health informatics, individualized effects, metabolic cost, sensorimotor effects, shapley value
National Category
Physiotherapy Neurology
Identifiers
urn:nbn:se:kth:diva-372579 (URN)10.1109/TNSRE.2025.3625089 (DOI)41129426 (PubMedID)2-s2.0-105020069589 (Scopus ID)
Note

QC 20251110

Available from: 2025-11-10 Created: 2025-11-10 Last updated: 2026-01-12Bibliographically approved
2. Gait pattern stratification in persons with incomplete spinal cord injury: A data-driven approach
Open this publication in new window or tab >>Gait pattern stratification in persons with incomplete spinal cord injury: A data-driven approach
(English)Manuscript (preprint) (Other academic)
Abstract [en]

Background: Incomplete spinal cord injury (iSCI) often causes heterogeneous locomotion dysfunctions, depending on remaining sensorimotor function. Clinical tests and traditional gait analysis have limited ability to quantify the diversity of gait impairments. Unsupervised learning techniques can objectively identify common gait patterns among the overall heterogeneity. Explainable artificial intelligence approaches, when combined with machine learning models, can reveal important features often missed by traditional gait analyses. This study presents a framework to characterize gait heterogeneity among persons with iSCI based on several data-driven methods. We aimed to stratify overall gait heterogeneity by deriving clusters with similarities without a priori identification of parameters, and to assess possible clinical correlations in the derived clusters. 

Methods: A cohort of 28 adults with iSCI and control group of 21 non-disabled adults were recruited. The iSCI group underwent a standard physical assessment of overall mobility, lower extremity strength, and spasticity. Both groups underwent instrumented 3D gait analysis, walking at self-selected pace. Distinct iSCI gait pattern subgroups were identified with dependent dynamic time warping and hierarchical agglomerative clustering. Distribution of clinical descriptives and outcome measures among and between groups were evaluated.  Gait predictors that distinguish each cluster from control gait were identified with a random forest classifier and explainable AI.

Results: Six distinct gait clusters were identified among the 280 iSCI gait cycles. Clusters with relatively low walking speed exhibited shorter step lengths and less ankle plantarflexion in pre-swing than controls. Gait patterns and walking performance in  clusters with high walking speed were relatively similar to controls. Overall muscle strength, walking independence, walking speed, step length, step width, sex distribution, and types of walking aids significantly differed between all six clusters. Ankle plantarflexion angle in pre-swing correlated strongly with walking speed and step length.

Conclusion: Through a series of advanced data-driven approaches, common gait patterns can be objectively identified and comprehensively characterized within a heterogeneous iSCI population. This work represents an initial step in developing individualized rehabilitation programs for persons with iSCI.

Keywords
multivariate time series, hierarchical clustering analysis, pathological gait, binary classification, shapley addictive explanations
National Category
Neurosciences Medical and Health Sciences Signal Processing
Research subject
Engineering Mechanics; Technology and Health
Identifiers
urn:nbn:se:kth:diva-375329 (URN)
Funder
Promobilia foundation, 23027, 18200, 23300, A22060, 21034Swedish Research Council, 2018-00750, 2024-05884Swedish Association of Persons with Neurological Disabilities, F2022-0019Personskadeförbundet RTP, 2022:02Norrbacka-Eugenia Foundation, 807/22, 806/23
Note

Resubmitted after minor revisions

QC 20260112

Available from: 2026-01-12 Created: 2026-01-12 Last updated: 2026-01-12Bibliographically approved
3. Characterizing the effects of muscle weakness on margins of stability and joint mechanics during gait in persons with incomplete paraplegia due to spinal cord injury
Open this publication in new window or tab >>Characterizing the effects of muscle weakness on margins of stability and joint mechanics during gait in persons with incomplete paraplegia due to spinal cord injury
(English)Manuscript (preprint) (Other academic)
Abstract [en]

Individuals with incomplete spinal cord injury (iSCI) exhibit diverse walking capabilities due to partial sensory and/or motor impairment below the injury level. This study examined how neuromuscular weakness patterns influence compensatory gait strategies, dynamic balance(margins of stability, MoS), and joint kinetics across iSCI subgroups compared to non-disabled controls. We analyzed gait data from 21 iSCI participants previously classified into four subgroups through dynamic time warping and hierarchical clustering in our previous study.

Temporospatial parameters, anterior-posterior (AP) and mediolateral (ML) MoS, and joint kinetics were extracted. The most functional group (mild plantarflexor weakness) walked comparably to controls but exhibited elevated peak hip flexion moments, suggesting increased risk for hip osteoarthritis or femoroacetabular impingement. The moderate plantarflexor weakness group demonstrated sagittal-plane compromises: slower walking speed, smaller magnitude of AP MoS, and lower peak ankle plantarflexion moments, power generation, and positive work during stance. Two lower-functioning groups with moderate-to-severe plantarflexor weakness combined with moderate hip extensor and hip abductor weakness showed similar sagittal-plane compensations plus frontal-plane compensations, including wider step width, higher ML MoS, lower peak hip extension and abduction moments. They also exhibited lower knee negative work during swing. Notably, the most impaired group relied primarily on hip muscles (extensors, abductors, and adductors) for stance-phase work generation, contrasting with other groups and controls who predominantly relied on plantarflexors. These findings demonstrate how varying levels of neuromuscular weakness,especially at the ankle and hip muscles, affect gait biomechanics after iSCI.

Keywords
pathological gait, gait balance, kinetics, muscle paresis
National Category
Medical and Health Sciences Neurosciences Rehabilitation Medicine
Research subject
Engineering Mechanics; Technology and Health
Identifiers
urn:nbn:se:kth:diva-375345 (URN)
Funder
Promobilia foundation, 23027, 18200, 23300, A22060, 21034Swedish Research Council, 2018-00750, 2024-05884Swedish Association of Persons with Neurological Disabilities, F2022-0019Personskadeförbundet RTP, 2022:02Norrbacka-Eugenia Foundation, 807/22, 806/23
Note

QC 20260114

Available from: 2026-01-12 Created: 2026-01-12 Last updated: 2026-01-14Bibliographically approved
4. Predictive gait simulation in incomplete spinal cord injury: A bilevel framework for optimal weight identification
Open this publication in new window or tab >>Predictive gait simulation in incomplete spinal cord injury: A bilevel framework for optimal weight identification
(English)Manuscript (preprint) (Other academic)
Abstract [en]

Predictive gait simulations hold promise for understanding motor control strategies in healthy individuals, but their application to pathological conditions like incomplete spinal cord injury (iSCI) remains challenging. Individuals with iSCI navigate multiple competing functional constraints rather than simply minimizing energy or fatigue, creating a multi-objective optimization problem with numerous viable solutions. Current approaches require manual fine-tuning of objective weights, preventing systematic exploration of compensatory strategies. In this study, we developed a bilevel optimization framework using Bayesian optimization to systematically identify objective weights that minimize prediction errors against experimental gait data. We tested this framework on a 69-year-old female with iSCI, asymmetric muscle weakness, and mild right knee osteoarthritis, comparing two multi-objective walking policies differing in incorporating pain avoidance at the right knee: one minimizing ground reaction force yank (Policy A) and another minimizing knee contact force (Policy B). Both policies shared six other objective functions. The framework successfully automated weight identification, with Policy A achieving superior performance across kinematic, kinetic, and ground reaction force deviation indices compared to Policy B and literature-based reference weights. These results demonstrate that bilevel optimization could systematically identify individual-specific compensatory gait strategies used in predictive gait simulations, offering a pathway toward personalized rehabilitation planning for neurological conditions. Future work should validate this approach across larger cohorts and incorporate refined biomechanical objectives.

Keywords
simulation, optimization, numerical modeling, pathological gait, biomechanics
National Category
Medical and Health Sciences Medical Modelling and Simulation Neurosciences
Research subject
Engineering Mechanics; Technology and Health; Applied and Computational Mathematics
Identifiers
urn:nbn:se:kth:diva-375347 (URN)
Funder
Promobilia foundation, 18200, 22300, 23300Swedish Research Council, 2018-00750
Note

QC 20260114

Available from: 2026-01-12 Created: 2026-01-12 Last updated: 2026-01-14Bibliographically approved

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